I'm doing the clutch bypass and there are two starter wires at the ignition harness. Do I ignore these two starter wires all together and just use wire coming off the clutch as the starter wire?

My remote start is set up to run two starter wires if needed.

By the way my remote start is made to be used for a manual transmission.

 

You have 2 starter wires. One is called the cold start wire. If you do not energize both wires during remote start your car will not start.

12volts wht/red - wht/pur + ignition harness
Starter blk/yel - blk/wht + ignition harness
Second Starter grn/blk - red/blu + ignition harness
Ignition blk/wht - blk/red + ignition harness
Accessory red/yel - red + ignition harness
Second Accessory blue - wht/blu + ignition harness
Power Lock lt. green/red - in drivers door at switch
Power Unlock green/yellow - in drivers door at switch
Parking Lights+ red/green steering column
Door Trigger red/white - low in drivers kick
Trunk/Hatch Pin purple/yellow - drivers kick or BCM
Hood Pin yellow/black - BCM
Trunk/Hatch Release purple/yellow - low drivers kick
Factory Alarm Arm arms w/ lock
Factory Alarm Disarm disarms w/ unlock
Tachometer white/green ac ECM
Brake Wire red/green + at brake switch
Horn Trigger green/white -

 

which one is the cold start?

 

Doesn't matter which one. You have to energize both. Your clutch has nothing to do with the starter wires. You can use the status output wire to bypass your clutch or you can just unplug it and twist the two wires together.

I really think you should have someone install it for you. Try contacting Don. He's close by in NJ. I'm down in MD outside of DC. You're about 1.5 hrs away.

 

Any one of us will vouch for Don (Pearl96Max). He does excellent work.